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1.
Bull Math Biol ; 86(6): 63, 2024 Apr 25.
Article in English | MEDLINE | ID: mdl-38664322

ABSTRACT

In this study, we present a mathematical model for plasmid spread in a growing biofilm, formulated as a nonlocal system of partial differential equations in a 1-D free boundary domain. Plasmids are mobile genetic elements able to transfer to different phylotypes, posing a global health problem when they carry antibiotic resistance factors. We model gene transfer regulation influenced by nearby potential receptors to account for recipient-sensing. We also introduce a promotion function to account for trace metal effects on conjugation, based on literature data. The model qualitatively matches experimental results, showing that contaminants like toxic metals and antibiotics promote plasmid persistence by favoring plasmid carriers and stimulating conjugation. Even at higher contaminant concentrations inhibiting conjugation, plasmid spread persists by strongly inhibiting plasmid-free cells. The model also replicates higher plasmid density in biofilm's most active regions.


Subject(s)
Biofilms , Gene Transfer, Horizontal , Mathematical Concepts , Models, Biological , Models, Genetic , Plasmids , Biofilms/growth & development , Plasmids/genetics , Conjugation, Genetic , Anti-Bacterial Agents/pharmacology
2.
J Phys Chem A ; 126(30): 4891-4901, 2022 Aug 04.
Article in English | MEDLINE | ID: mdl-35880827

ABSTRACT

The anharmonic infrared (IR) emission spectra of phenylacetylene C6H5CCH and an isotopologue C6H5CCD induced by 193 nm UV excitation have been investigated in the gas phase. The study has been operated with a homemade IR spectrometer enabling to record time- and wavelength-resolved spectra between 2.5 and 4.5 µm, emitted all along the collisional cooling. The analysis is supported by a kinetic Monte Carlo simulation in the vibrational harmonic approximation. For both species, the anharmonic shifts of the acetylenic C-H or C-D stretching modes and the aromatic C-H stretching modes are studied for band positions and bandwidths in terms of the internal energy. For C6H5CCD, the internal energy dependence of the emission intensity band ratio is investigated and rationalized. This work demonstrates the potential of time-resolved IR emission spectroscopy to explore anharmonicity of astrophysically relevant molecules.

3.
Proc Natl Acad Sci U S A ; 107(14): 6370-5, 2010 Apr 06.
Article in English | MEDLINE | ID: mdl-20308547

ABSTRACT

How does an animal age in natural conditions? Given the multifaceted nature of senescence, identifying the effects of age on physiology and behavior remains challenging. We investigated the effects of age on a broad array of phenotypic traits in a wild, long-lived animal, the wandering albatross. We studied foraging behavior using satellite tracking and activity loggers in males and females (age 6-48+ years), and monitored reproductive performance and nine markers of baseline physiology known to reflect senescence in vertebrates (humoral immunity, oxidative stress, antioxidant defenses, and hormone levels). Age strongly affected foraging behavior and reproductive performance, but not baseline physiology. Consistent with results of mammal and human studies, age affected males and females differently. Overall, our findings demonstrate that age, sex, and foraging ability interact in shaping aging patterns in natural conditions. Specifically, we found an unexpected pattern of spatial segregation by age; old males foraged in remote Antarctica waters, whereas young and middle-aged males never foraged south of the Polar Front. Old males traveled a greater distance but were less active at the sea surface, and returned from sea with elevated levels of stress hormone (corticosterone), mirroring a low foraging efficiency. In contrast to findings in captive animals and short-lived birds, and consistent with disposable soma theory, we found no detectable age-related deterioration of baseline physiology in albatrosses. We propose that foraging efficiency (i.e., the ability of individuals to extract energy from their environment) might play a central role in shaping aging patterns in natural conditions.


Subject(s)
Aging , Birds/physiology , Animal Migration , Animals , Feeding Behavior , Female , Male , Sex Characteristics , Sexual Behavior, Animal
4.
Epilepsia ; 49(2): 343-8, 2008 Feb.
Article in English | MEDLINE | ID: mdl-18028411

ABSTRACT

Severe myoclonic epilepsy in infancy (SMEI) is a rare, but severe disorder with seizures typically resistant to conventional antiepileptic drugs. The objective of the present study was to systematically review the literature on the available treatments for SMEI. Databases searched included Medline, Embase, and Cochrane. We used a fixed effect model to summarize the odds ratio of seizures rates and a logistic model to evaluate the influence of patient characteristics on treatment effect. We found 23 uncontrolled studies and 2 randomized controlled trials (RCTs) that compared stiripentol with placebo. Overall, 64 children aged between 3 and 20 years were included in the two RCTs. The odds ratio of responding to stiripentol relative to placebo was 32 (CI: 6.2, 161) and stiripentol reduced seizure rate by 70% (93%; 47%). The multivariate analysis does not suggest any differences within subgroups of participants and cotherapy. Results of uncontrolled studies in children with SMEI are potentially biased and do not provide valid information on the benefits and harms of treatments. The two RCTs identified, however, were performed with the same objectives and design and showed that seizure frequency is greatly reduced by stiripentol in children with SMEI after 2 months of treatment.


Subject(s)
Anticonvulsants/therapeutic use , Epilepsies, Myoclonic/drug therapy , Adolescent , Adult , Child , Child, Preschool , Databases as Topic/statistics & numerical data , Dioxolanes/therapeutic use , Epilepsies, Myoclonic/diagnosis , Female , Follow-Up Studies , Humans , Male , Odds Ratio , Placebos , Publication Bias , Randomized Controlled Trials as Topic/statistics & numerical data , Treatment Outcome
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